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Abstract BackgroundCoral reefs house about 25% of marine biodiversity and are critical for the livelihood of many communities by providing food, tourism revenue, and protection from wave surge. These magnificent ecosystems are under existential threat from anthropogenic climate change. Whereas extensive ecological and physiological studies have addressed coral response to environmental stress, high-quality reference genome data are lacking for many of these species. The latter issue hinders efforts to understand the genetic basis of stress resistance and to design informed coral conservation strategies. ResultsWe report genome assemblies from 4 key Hawaiian coral species, Montipora capitata, Pocillopora acuta, Pocillopora meandrina, and Porites compressa. These species, or members of these genera, are distributed worldwide and therefore of broad scientific and ecological importance. For M. capitata, an initial assembly was generated from short-read Illumina and long-read PacBio data, which was then scaffolded into 14 putative chromosomes using Omni-C sequencing. For P. acuta, P. meandrina, and P. compressa, high-quality assemblies were generated using short-read Illumina and long-read PacBio data. The P. acuta assembly is from a triploid individual, making it the first reference genome of a nondiploid coral animal. ConclusionsThese assemblies are significant improvements over available data and provide invaluable resources for supporting multiomics studies into coral biology, not just in Hawaiʻi but also in other regions, where related species exist. The P. acuta assembly provides a platform for studying polyploidy in corals and its role in genome evolution and stress adaptation in these organisms. 

Photometry shown in Figure Extended Data 4 (a) of Wang, Lingzhi, et al. 2024, Nature Astronomy, https://doi.org/10.1038/s41550-024-02197-9.Phase is days since B-band maximum MJD 58352.BVgri-band photometry from 1-m network at Las Cumbres Observatory.SN2018evt_lcogt_lc.datBVgri-band photometry from 2.4-m LiJiang Telescope (LJT) and 60/90-cm XingLong Schmidt Telescope (XLST)SN2018evt_xlt_ljt_lc.datOptical and NIR spectra data shown in Figures Extended Data 2, 3, and Table Extended Data 2 of Wang, Lingzhi, et al. 2024, Nature Astronomy, NIR spectraSN2018evt_181224_spex.txt SN2018evt_190511_spex.txtSN2018evt_190617_spex.txtSN2018evt_200119_spex.txtSN2018evt_20190101_gnirs.txtSN2018evt_20190108_gnirs.txtSN2018evt_20190516_fire.datSN2018evt_20190712_fire.datOptical spectraOptical spectra observed with 2.4-m LiJiang Telescope (LJT)SN2018evt_190104_LJT_G3.datSN2018evt_190131_LJT_G3.datSN2018evt_190328_LJT_G3.datSN2018evt_190520_LJT_G3.datOptical spectra observed with 2.16-m XingLong Telescope (XLT)SN2018evt_20190208_2458551.3570_bao_bfosc.txtSN2018evt_20190220_2458563.3588_bao-bfosc.txtSN2018evt_20190413_2458587.2169_bao-bfosc.txtOptical spectra observed with 3.6-m ESO New Technology Telescope (NTT)SN2018evt_20180812_NTT_Gr13_Free_slit1.0_58346_1_e.asciSN2018evt_20190425_NTT_Gr13_Free_slit1.0_58599_1_e.asciSN2018evt_20190512_NTT_Gr13_Free_slit1.0_58616_1_e.asciSN2018evt_20190608_NTT_Gr13_Free_slit1.0_58643_1_e.asciSN2018evt_20200218_NTT_Gr13_Free_slit1.0_58899_1_e.asciSN2018evt_20200322_NTT_Gr13_Free_slit1.0_58931_1_e.asciOptical spectrum observed with WiFes mounted on 2.3-m telescope at the Siding Spring Observatory (WiFeS)SN2018evt_20190624_ANU_Wifes.datOptical spectrum observed with 2.0-m Faulkes Telescope North (FTN)/FLOYDSSN2018evt_20191224_FTN-floyds-redblu_145742.306.asciiSN2018evt_20200119_FTN-floyds-redblu_133856.906.asciiSN2018evt_20200203_FTN-floyds-redblu_125905.990.ascii